Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Gm22238-201ENSMUST00000175222 88 ntBASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7n-4A0A075B620 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7n-4A0A075B620 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7n-4A0A075B620 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Idnk-204ENSMUST00000226010 1898 ntBASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav7n-4A0A075B620 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms