Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav4n-4A0A075B615 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav4n-4A0A075B615 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4n-4A0A075B615 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Gm10232-201ENSMUST00000089221 720 ntBASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4n-4A0A075B615 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4n-4A0A075B615 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms