Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Mir1963-201ENSMUST00000158594 59 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm25048-201ENSMUST00000158598 91 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm8614-201ENSMUST00000182528 978 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Mir7222-201ENSMUST00000183740 75 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm28389-201ENSMUST00000190090 697 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm20770-201ENSMUST00000193474 694 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm10048-201ENSMUST00000194196 372 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm43215-201ENSMUST00000199108 252 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm44485-201ENSMUST00000199569 137 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm43554-201ENSMUST00000199987 186 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm8319-201ENSMUST00000205708 641 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm21041-201ENSMUST00000214829 823 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 AC122295.1-201ENSMUST00000223476 388 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 AC160120.1-201ENSMUST00000227446 663 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm11743-201ENSMUST00000117385 1735 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.88□□□□□ -1.63
Lima1Q9ERG0 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm13440-201ENSMUST00000121665 496 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm23993-201ENSMUST00000157478 144 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm24216-201ENSMUST00000158259 117 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Mir3058-201ENSMUST00000175126 91 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Mir7687-201ENSMUST00000184722 59 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm29509-201ENSMUST00000185716 321 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm28429-201ENSMUST00000188521 363 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm29813-201ENSMUST00000195856 447 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm42542-201ENSMUST00000197978 268 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm4587-201ENSMUST00000209135 637 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.87□□□□□ -1.63
Lima1Q9ERG0 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lima1Q9ERG0 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm7206-201ENSMUST00000117730 508 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm13491-201ENSMUST00000118267 235 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm11481-201ENSMUST00000120069 255 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm15275-201ENSMUST00000154752 347 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm24402-201ENSMUST00000157873 91 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm23965-201ENSMUST00000157969 142 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm26169-201ENSMUST00000158420 135 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm3008-201ENSMUST00000160566 571 ntBASIC4.86□□□□□ -1.63
Lima1Q9ERG0 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.86□□□□□ -1.63
Lima1Q9ERG0 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms