Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Gm7648-201ENSMUST00000173036 1658 ntBASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Ddx56Q9D0R4 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm14771-201ENSMUST00000118249 203 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm11484-201ENSMUST00000119808 338 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm15331-201ENSMUST00000120225 385 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm16100-201ENSMUST00000120489 231 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm23034-201ENSMUST00000158001 147 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm25439-201ENSMUST00000158280 131 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm25413-201ENSMUST00000158544 312 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm10177-201ENSMUST00000160052 444 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm15795-201ENSMUST00000160969 553 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm9006-201ENSMUST00000165520 841 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm24303-201ENSMUST00000178237 126 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm36954-201ENSMUST00000195362 363 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm6064-201ENSMUST00000203999 454 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm45628-201ENSMUST00000210849 274 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Gm6171-201ENSMUST00000220760 645 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 AC121114.1-201ENSMUST00000228522 570 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Olfr467-201ENSMUST00000084756 927 ntBASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ddx56Q9D0R4 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm23294-201ENSMUST00000104150 164 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm26376-201ENSMUST00000104784 110 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm14050-201ENSMUST00000117052 346 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm13428-201ENSMUST00000117540 365 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm13866-201ENSMUST00000118901 968 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm16423-201ENSMUST00000120078 947 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm14977-201ENSMUST00000121626 812 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm14237-201ENSMUST00000122080 430 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm13131-201ENSMUST00000122228 321 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm26915-201ENSMUST00000183080 748 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm4742-201ENSMUST00000200261 771 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm44038-201ENSMUST00000203952 889 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm19237-201ENSMUST00000205036 1132 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm45596-201ENSMUST00000209279 434 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 Gm20786-201ENSMUST00000212649 436 ntBASIC6.02□□□□□ -1.45
Ddx56Q9D0R4 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms