Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm37189-201ENSMUST00000192131 298 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm5853-201ENSMUST00000197183 632 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm44361-201ENSMUST00000197960 94 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm43513-201ENSMUST00000199779 1076 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm45034-201ENSMUST00000206831 482 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm45814-201ENSMUST00000212646 775 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC153557.1-201ENSMUST00000217697 403 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 CT030184.2-201ENSMUST00000223064 263 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC154861.1-201ENSMUST00000223767 800 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC115878.1-201ENSMUST00000227247 334 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm6436-201ENSMUST00000077163 451 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm21731-201ENSMUST00000079524 489 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Olfr575-201ENSMUST00000084812 957 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm7133-201ENSMUST00000187797 2039 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 AC142245.1-201ENSMUST00000226611 1505 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm43121-201ENSMUST00000199065 1305 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm12369-201ENSMUST00000121343 942 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm21726-201ENSMUST00000179654 392 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm8458-201ENSMUST00000196658 819 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm8041-201ENSMUST00000199755 616 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm44041-201ENSMUST00000203678 396 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm2926-201ENSMUST00000205625 239 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 AC115793.1-201ENSMUST00000216605 215 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm45457-201ENSMUST00000209931 3089 ntBASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Trim47Q8C0E3 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm37730-201ENSMUST00000192432 2211 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Trim47Q8C0E3 Gm43961-201ENSMUST00000203289 1872 ntBASIC7.24□□□□□ -1.25
Trim47Q8C0E3 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms