Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm21405-201ENSMUST00000179024 930 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Mir6416-201ENSMUST00000183664 117 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm21191-201ENSMUST00000186484 930 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm29356-201ENSMUST00000186935 373 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm29503-201ENSMUST00000191044 930 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm2147-201ENSMUST00000193588 639 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 AC146601.1-201ENSMUST00000227910 905 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.21□□□□□ -1.58
Nup54Q8BTS4 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm17791-201ENSMUST00000185660 1501 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm13503-201ENSMUST00000119017 446 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm15838-201ENSMUST00000161575 180 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm18350-201ENSMUST00000187395 955 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm42428-201ENSMUST00000198677 302 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm44184-201ENSMUST00000204290 132 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm45185-201ENSMUST00000207556 404 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm44690-201ENSMUST00000207984 382 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Nup54Q8BTS4 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm8202-201ENSMUST00000117682 310 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm14512-201ENSMUST00000117924 230 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm16345-201ENSMUST00000146065 158 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm25846-201ENSMUST00000158013 135 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm23546-201ENSMUST00000158211 137 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm4617-201ENSMUST00000178993 331 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm2497-201ENSMUST00000189539 601 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm22897-202ENSMUST00000197782 127 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm44623-201ENSMUST00000207934 434 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 AC152169.2-201ENSMUST00000224558 613 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 AC161269.1-201ENSMUST00000228426 318 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Nup54Q8BTS4 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms