Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24254-201ENSMUST00000083702 104 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm26108-201ENSMUST00000083973 191 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sh3rf1Q69ZI1 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14580-201ENSMUST00000119122 718 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11504-201ENSMUST00000120211 173 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Mir6348-201ENSMUST00000183804 120 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm27152-201ENSMUST00000183828 99 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm8367-201ENSMUST00000186145 887 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28625-201ENSMUST00000188309 205 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm2229-201ENSMUST00000193328 710 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm38291-201ENSMUST00000193671 259 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm42924-201ENSMUST00000197261 185 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm8774-201ENSMUST00000203621 692 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45192-201ENSMUST00000206749 283 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44911-201ENSMUST00000208436 1062 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45316-201ENSMUST00000210128 162 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm4556-201ENSMUST00000217808 355 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm17849-201ENSMUST00000219788 853 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm9845-201ENSMUST00000056409 598 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm23628-201ENSMUST00000082464 173 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25079-201ENSMUST00000082529 203 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Mir181a-1-201ENSMUST00000083631 87 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
Sh3rf1Q69ZI1 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14365-201ENSMUST00000117535 587 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11256-201ENSMUST00000118109 829 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm14794-201ENSMUST00000118181 192 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12040-201ENSMUST00000118357 537 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12307-201ENSMUST00000120581 590 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12041-201ENSMUST00000121606 602 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm3810-201ENSMUST00000122413 476 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12152-201ENSMUST00000122465 684 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm16259-201ENSMUST00000145241 553 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm23954-201ENSMUST00000157213 353 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25898-201ENSMUST00000158303 106 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm9529-201ENSMUST00000177598 579 ntBASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sh3rf1Q69ZI1 Gm20773-201ENSMUST00000178940 681 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms