Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm25419-201ENSMUST00000104215 191 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm12039-201ENSMUST00000118219 180 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm11790-201ENSMUST00000119569 455 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm16463-201ENSMUST00000120527 721 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm8321-201ENSMUST00000181691 980 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Mir6971-201ENSMUST00000183497 63 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Mir6416-201ENSMUST00000183664 117 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm37030-201ENSMUST00000194254 295 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm5842-201ENSMUST00000195073 622 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm6562-201ENSMUST00000221903 464 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
Upf3bQ3ULL6 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.34□□□□□ -1.56
Upf3bQ3ULL6 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.34□□□□□ -1.56
Upf3bQ3ULL6 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
Upf3bQ3ULL6 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
Upf3bQ3ULL6 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm12641-201ENSMUST00000117874 985 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm11984-201ENSMUST00000118142 766 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm15971-201ENSMUST00000119372 211 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm12808-201ENSMUST00000120597 404 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm15227-201ENSMUST00000121844 399 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm15275-201ENSMUST00000154752 347 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm26731-201ENSMUST00000180683 543 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm27543-201ENSMUST00000183562 177 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm27492-201ENSMUST00000185194 187 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm28660-201ENSMUST00000186496 253 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm37659-201ENSMUST00000194574 111 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm8999-201ENSMUST00000204951 969 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.33□□□□□ -1.56
Upf3bQ3ULL6 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm14756-201ENSMUST00000116395 240 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm15981-201ENSMUST00000119196 457 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Ighv1-3-201ENSMUST00000192764 302 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm43655-201ENSMUST00000197367 222 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm43724-201ENSMUST00000197516 226 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm43968-201ENSMUST00000203388 389 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 Gm272-201ENSMUST00000222073 919 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 AC133517.2-201ENSMUST00000226820 690 ntBASIC5.32□□□□□ -1.56
Upf3bQ3ULL6 AC116724.1-201ENSMUST00000227900 972 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms