Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm16007-201ENSMUST00000117837 286 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm11987-201ENSMUST00000118524 381 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm12007-201ENSMUST00000120978 597 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm22326-201ENSMUST00000158897 351 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm27773-201ENSMUST00000184087 78 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm30280-201ENSMUST00000192214 262 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm42566-201ENSMUST00000197120 643 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm43436-201ENSMUST00000199308 147 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm44485-201ENSMUST00000199569 137 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC8.06□□□□□ -1.12
Col17a1Q07563 AC134577.1-201ENSMUST00000227572 295 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 AC131100.2-201ENSMUST00000227701 998 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col17a1Q07563 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC8.06□□□□□ -1.12
Col17a1Q07563 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col17a1Q07563 Mir194-1-201ENSMUST00000083647 67 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 n-R5s170-201ENSMUST00000083726 113 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 AC154642.2-201ENSMUST00000223657 2485 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col17a1Q07563 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col17a1Q07563 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col17a1Q07563 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm43605-201ENSMUST00000199663 3426 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm12852-201ENSMUST00000119478 719 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm36974-201ENSMUST00000194200 1071 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC8.06□□□□□ -1.12
Col17a1Q07563 AC129202.3-201ENSMUST00000224413 733 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Col17a1Q07563 Snora52-201ENSMUST00000082732 137 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 n-R5s166-201ENSMUST00000082898 121 ntBASIC8.06□□□□□ -1.12
Col17a1Q07563 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Col17a1Q07563 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Col17a1Q07563 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm19136-201ENSMUST00000190706 2067 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm44248-201ENSMUST00000203079 1549 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm26140-201ENSMUST00000103807 110 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm14906-201ENSMUST00000119265 390 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm11790-201ENSMUST00000119569 455 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm9043-201ENSMUST00000119677 314 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm12332-201ENSMUST00000121397 922 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm24111-201ENSMUST00000175491 97 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm27193-201ENSMUST00000184217 586 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC8.05□□□□□ -1.12
Col17a1Q07563 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm28492-201ENSMUST00000190899 1019 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Trbv11-201ENSMUST00000194354 260 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Gm17994-201ENSMUST00000209260 533 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.05□□□□□ -1.12
Col17a1Q07563 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col17a1Q07563 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col17a1Q07563 AC103672.2-201ENSMUST00000228146 1687 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC8.05□□□□□ -1.12
Col17a1Q07563 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Col17a1Q07563 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 AC124414.1-201ENSMUST00000218033 2946 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm18508-201ENSMUST00000215790 1642 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 AC142245.1-201ENSMUST00000226611 1505 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm7988-201ENSMUST00000196623 2297 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC8.04□□□□□ -1.12
Col17a1Q07563 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm28468-201ENSMUST00000188536 615 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm17956-201ENSMUST00000199931 838 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm45081-201ENSMUST00000206281 572 ntBASIC8.04□□□□□ -1.12
Col17a1Q07563 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col17a1Q07563 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.04□□□□□ -1.12
Col17a1Q07563 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.04□□□□□ -1.12
Col17a1Q07563 AC154527.3-201ENSMUST00000225519 989 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms