Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm43228-201ENSMUST00000200735 264 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm18205-201ENSMUST00000209215 841 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox9Q04887 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC6.13□□□□□ -1.43
Sox9Q04887 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm37598-201ENSMUST00000194506 1301 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Gm8734-201ENSMUST00000211669 1312 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sox9Q04887 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.13□□□□□ -1.43
Sox9Q04887 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm12874-201ENSMUST00000117190 913 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm5943-201ENSMUST00000119458 459 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm5387-201ENSMUST00000119776 857 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm14991-201ENSMUST00000119913 598 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm13815-201ENSMUST00000119963 412 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm25826-201ENSMUST00000157090 137 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm22794-201ENSMUST00000157228 306 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm26352-201ENSMUST00000158223 125 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm43059-201ENSMUST00000202437 1388 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm44739-201ENSMUST00000205294 1426 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm45458-201ENSMUST00000209900 522 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm17820-201ENSMUST00000220213 1068 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm46369-201ENSMUST00000221577 401 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox9Q04887 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm24707-201ENSMUST00000082812 107 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Gm24200-201ENSMUST00000082955 157 ntBASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Sox9Q04887 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Sox9Q04887 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.12□□□□□ -1.43
Sox9Q04887 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Sox9Q04887 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms