Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3f3aP84244 Gm19666-201ENSMUST00000198176 1893 ntBASIC4.49□□□□□ -1.69
H3f3aP84244 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
H3f3aP84244 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3f3aP84244 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
H3f3aP84244 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.49□□□□□ -1.69
H3f3aP84244 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3f3aP84244 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3f3aP84244 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3f3aP84244 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
H3f3aP84244 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Gm15357-201ENSMUST00000119160 285 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm14520-201ENSMUST00000119258 387 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm13738-201ENSMUST00000122437 469 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Gm23537-201ENSMUST00000157536 330 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm26404-201ENSMUST00000158498 109 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC4.48□□□□□ -1.69
H3f3aP84244 Gm26318-201ENSMUST00000176507 96 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Gm18802-201ENSMUST00000186270 888 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm28061-201ENSMUST00000189085 807 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm20239-201ENSMUST00000196610 982 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm42579-201ENSMUST00000200512 734 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm9038-201ENSMUST00000203400 604 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm6049-201ENSMUST00000222369 458 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 AC121912.1-201ENSMUST00000227525 1201 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
H3f3aP84244 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.48□□□□□ -1.69
H3f3aP84244 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.48□□□□□ -1.69
H3f3aP84244 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
H3f3aP84244 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
H3f3aP84244 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3f3aP84244 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
H3f3aP84244 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 AC154368.2-201ENSMUST00000222334 1724 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
H3f3aP84244 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.47□□□□□ -1.69
H3f3aP84244 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm15390-201ENSMUST00000120323 738 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm25290-201ENSMUST00000122796 144 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm5777-201ENSMUST00000177265 448 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm8321-201ENSMUST00000181691 980 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm8669-201ENSMUST00000183839 945 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm37884-201ENSMUST00000191857 818 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm43655-201ENSMUST00000197367 222 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 AC138284.5-201ENSMUST00000214389 652 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm23456-201ENSMUST00000083335 137 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm31258-201ENSMUST00000194532 3297 ntBASIC4.47□□□□□ -1.69
H3f3aP84244 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3f3aP84244 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
H3f3aP84244 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.69
H3f3aP84244 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
H3f3aP84244 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
H3f3aP84244 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
H3f3aP84244 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms