Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm16082-201ENSMUST00000115992 377 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm8202-201ENSMUST00000117682 310 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm12677-201ENSMUST00000118668 426 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm11196-201ENSMUST00000119052 395 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm23837-201ENSMUST00000122656 286 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm6673-201ENSMUST00000166114 700 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm27690-201ENSMUST00000184596 126 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Mir6899-201ENSMUST00000184798 64 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm21461-201ENSMUST00000200382 863 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm43136-201ENSMUST00000200403 636 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC4.84□□□□□ -1.63
Cdx2P43241 Gm45236-201ENSMUST00000208632 229 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Gm19921-201ENSMUST00000210505 703 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Cdx2P43241 CT030242.3-201ENSMUST00000221231 581 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.84□□□□□ -1.63
Cdx2P43241 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Cdx2P43241 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Cdx2P43241 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Cdx2P43241 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Cdx2P43241 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Cdx2P43241 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Gm13000-201ENSMUST00000120937 496 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Gm12110-201ENSMUST00000121601 579 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Mir3104-201ENSMUST00000174911 63 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Gm22852-201ENSMUST00000177899 101 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Gm21850-201ENSMUST00000179792 359 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Gm6366-201ENSMUST00000198766 826 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 AC154527.3-201ENSMUST00000225519 989 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC4.83□□□□□ -1.64
Cdx2P43241 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdx2P43241 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdx2P43241 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 AC132852.2-201ENSMUST00000216052 2794 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdx2P43241 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Gm15772-201ENSMUST00000118533 438 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Gm11699-201ENSMUST00000119016 401 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Gm15390-201ENSMUST00000120323 738 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm24444-201ENSMUST00000157244 308 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Gm23046-201ENSMUST00000158369 284 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Scarna10-201ENSMUST00000158992 325 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Mir6975-201ENSMUST00000184879 61 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm5750-201ENSMUST00000218711 801 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm37456-201ENSMUST00000193176 5837 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.82□□□□□ -1.64
Cdx2P43241 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdx2P43241 Gm43843-201ENSMUST00000202396 1587 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms