Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Col18a1P39061 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Gm9308-201ENSMUST00000119073 448 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Gm11357-201ENSMUST00000119758 954 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Gm11349-201ENSMUST00000122209 1116 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Gm22395-201ENSMUST00000177427 96 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Gm19791-201ENSMUST00000180398 859 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Gm5842-201ENSMUST00000195073 622 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC7.14□□□□□ -1.27
Col18a1P39061 Gm2623-201ENSMUST00000199229 286 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Gm8719-201ENSMUST00000203602 534 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 AC140210.1-201ENSMUST00000224961 534 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.14□□□□□ -1.27
Col18a1P39061 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Col18a1P39061 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.14□□□□□ -1.27
Col18a1P39061 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm44248-201ENSMUST00000203079 1549 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm7269-201ENSMUST00000210819 1373 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm5746-201ENSMUST00000183550 2200 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm8202-201ENSMUST00000117682 310 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm15357-201ENSMUST00000119160 285 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm13902-201ENSMUST00000120168 605 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm17014-201ENSMUST00000120765 168 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm5699-201ENSMUST00000152491 723 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm5252-201ENSMUST00000189030 909 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm37878-201ENSMUST00000192108 387 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm2077-201ENSMUST00000195017 319 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm32308-201ENSMUST00000203053 280 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm4602-201ENSMUST00000203198 308 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm44726-201ENSMUST00000203427 217 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC7.13□□□□□ -1.27
Col18a1P39061 AC192333.2-201ENSMUST00000224771 196 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 AC133910.1-201ENSMUST00000228128 624 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Col18a1P39061 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm17101-201ENSMUST00000169520 1588 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Col18a1P39061 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Col18a1P39061 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm14628-201ENSMUST00000117508 635 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm15090-201ENSMUST00000118787 1196 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm15089-201ENSMUST00000122332 1196 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm25962-201ENSMUST00000157173 168 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm24239-201ENSMUST00000157791 255 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm23852-201ENSMUST00000158376 77 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm26362-201ENSMUST00000158865 315 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm8224-201ENSMUST00000166178 497 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm43582-201ENSMUST00000196149 343 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm38395-201ENSMUST00000199904 830 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm42926-201ENSMUST00000200496 697 ntBASIC7.13□□□□□ -1.27
Col18a1P39061 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Col18a1P39061 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
Col18a1P39061 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 AC124581.3-201ENSMUST00000224270 1624 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Col18a1P39061 AC121960.2-201ENSMUST00000227349 3446 ntBASIC7.12□□□□□ -1.27
Col18a1P39061 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms