Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm16107-201ENSMUST00000162523 862 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm37636-201ENSMUST00000193583 359 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm8458-201ENSMUST00000196658 819 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Gm19096-201ENSMUST00000209705 766 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 AC153729.2-201ENSMUST00000215166 560 ntTSL 3 BASIC5.64□□□□□ -1.51
Col2a1P28481 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 AC098742.1-201ENSMUST00000227945 373 ntBASIC5.64□□□□□ -1.51
Col2a1P28481 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col2a1P28481 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.64□□□□□ -1.51
Col2a1P28481 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Col2a1P28481 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Col2a1P28481 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Col2a1P28481 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm17149-201ENSMUST00000164712 375 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm26828-201ENSMUST00000180640 172 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Gm29086-201ENSMUST00000186774 222 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Gm29085-201ENSMUST00000187108 225 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Gm29138-201ENSMUST00000191444 348 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Gm38046-201ENSMUST00000192733 550 ntBASIC5.63□□□□□ -1.51
Col2a1P28481 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col2a1P28481 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col2a1P28481 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col2a1P28481 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.62□□□□□ -1.51
Col2a1P28481 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
Col2a1P28481 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col2a1P28481 AC120347.1-201ENSMUST00000223326 1639 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Col2a1P28481 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col2a1P28481 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col2a1P28481 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col2a1P28481 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col2a1P28481 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col2a1P28481 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col2a1P28481 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Gm14082-201ENSMUST00000118582 801 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Gm4914-201ENSMUST00000119757 459 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.62□□□□□ -1.51
Col2a1P28481 Gm24944-201ENSMUST00000158330 128 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Gm19201-201ENSMUST00000210127 778 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col2a1P28481 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col2a1P28481 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col2a1P28481 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col2a1P28481 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col2a1P28481 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col2a1P28481 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col2a1P28481 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.62□□□□□ -1.51
Col2a1P28481 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Pfkfb2-202ENSMUST00000066863 4425 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm43085-201ENSMUST00000202859 3132 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC5.61□□□□□ -1.51
Col2a1P28481 Erbin-202ENSMUST00000053927 6103 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Col2a1P28481 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm12520-201ENSMUST00000117493 316 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm12190-201ENSMUST00000120001 187 ntBASIC5.61□□□□□ -1.51
Col2a1P28481 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Col2a1P28481 Gm5558-201ENSMUST00000178933 495 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms