Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.33□□□□□ -1.72
UbbP0CG49 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UbbP0CG49 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
UbbP0CG49 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UbbP0CG49 Gm21112-201ENSMUST00000212224 578 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 Gm7760-201ENSMUST00000212265 578 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 Gm7807-201ENSMUST00000212475 578 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 Gm6171-201ENSMUST00000220760 645 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 Zfp429-203ENSMUST00000224684 524 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UbbP0CG49 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UbbP0CG49 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UbbP0CG49 n-R5s204-201ENSMUST00000082972 119 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UbbP0CG49 Olfr1277-201ENSMUST00000099619 962 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UbbP0CG49 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.33□□□□□ -1.72
UbbP0CG49 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UbbP0CG49 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
UbbP0CG49 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UbbP0CG49 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
UbbP0CG49 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
UbbP0CG49 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm11975-201ENSMUST00000118772 481 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Mup-ps19-201ENSMUST00000120390 519 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC4.32□□□□□ -1.72
UbbP0CG49 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm24690-201ENSMUST00000157759 97 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Gm25714-201ENSMUST00000158626 296 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm6673-201ENSMUST00000166114 700 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Gm22923-201ENSMUST00000174952 110 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Mir6539-201ENSMUST00000183732 110 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Mir6417-201ENSMUST00000183815 116 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Gm17953-201ENSMUST00000192061 667 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Gm37882-201ENSMUST00000195254 196 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Gm44485-201ENSMUST00000199569 137 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC4.32□□□□□ -1.72
UbbP0CG49 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.32□□□□□ -1.72
UbbP0CG49 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC4.32□□□□□ -1.72
UbbP0CG49 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr801-201ENSMUST00000072063 957 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm24207-201ENSMUST00000082781 108 ntBASIC4.32□□□□□ -1.72
UbbP0CG49 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UbbP0CG49 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
UbbP0CG49 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UbbP0CG49 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
UbbP0CG49 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UbbP0CG49 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC4.31□□□□□ -1.72
UbbP0CG49 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC4.31□□□□□ -1.72
UbbP0CG49 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
UbbP0CG49 Gm42661-201ENSMUST00000202364 1442 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Gm42561-201ENSMUST00000202563 1442 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
UbbP0CG49 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
UbbP0CG49 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UbbP0CG49 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
UbbP0CG49 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
UbbP0CG49 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.31□□□□□ -1.72
UbbP0CG49 Gm12261-201ENSMUST00000117499 645 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Gm13033-201ENSMUST00000117591 1057 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Gm15531-201ENSMUST00000118062 252 ntBASIC4.31□□□□□ -1.72
UbbP0CG49 Gm13755-201ENSMUST00000118509 305 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms