Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm14172-201ENSMUST00000118255 644 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm25278-201ENSMUST00000157267 120 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Mir6899-201ENSMUST00000184798 64 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm37700-201ENSMUST00000192617 965 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm19131-201ENSMUST00000203408 789 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm45343-201ENSMUST00000210452 828 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm19514-201ENSMUST00000206856 4489 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm13854-201ENSMUST00000121183 1679 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm14082-201ENSMUST00000118582 801 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm13172-201ENSMUST00000118685 256 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Gm27568-201ENSMUST00000184220 99 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 AC098742.1-201ENSMUST00000227945 373 ntBASIC9.1□□□□□ -0.95
Ccdc180J3QNE4 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm11484-201ENSMUST00000119808 338 ntBASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 AC138765.1-201ENSMUST00000228657 385 ntBASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Ccdc180J3QNE4 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Gm25595-201ENSMUST00000102273 97 ntBASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 AC158511.1-201ENSMUST00000223622 764 ntBASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 CT025552.2-201ENSMUST00000225497 317 ntBASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 AC139758.1-201ENSMUST00000226573 930 ntBASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Gm37283-201ENSMUST00000193111 1571 ntBASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Ccdc180J3QNE4 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm8221-201ENSMUST00000178052 564 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Mir6391-201ENSMUST00000184391 104 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm27818-201ENSMUST00000184536 159 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 AC154627.3-201ENSMUST00000228441 334 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm6863-201ENSMUST00000052882 636 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Mecom-201ENSMUST00000061088 348 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Olfr881-201ENSMUST00000074611 948 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm10115-201ENSMUST00000076071 1228 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm24444-201ENSMUST00000157244 308 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm22940-201ENSMUST00000158560 155 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm16107-201ENSMUST00000162523 862 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Mir7074-201ENSMUST00000183884 63 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm4602-201ENSMUST00000203198 308 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm5339-201ENSMUST00000210551 1102 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm45608-201ENSMUST00000210948 389 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 CT573086.3-201ENSMUST00000228762 594 ntBASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Ccdc180J3QNE4 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm45853-201ENSMUST00000212310 3171 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm45644-201ENSMUST00000210255 2740 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm37696-201ENSMUST00000194223 3349 ntBASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Ccdc180J3QNE4 Gm14711-201ENSMUST00000117056 217 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms