Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mir484-201ENSMUST00000093566 67 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm37775-201ENSMUST00000194120 2313 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm45183-201ENSMUST00000207937 1497 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Mir6537-201ENSMUST00000184150 110 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm17953-201ENSMUST00000192061 667 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 AC164597.1-201ENSMUST00000226538 514 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm45553-201ENSMUST00000209929 507 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Ctnnd1-218ENSMUST00000111692 6170 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm14324-201ENSMUST00000121358 3051 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm4832-201ENSMUST00000182679 399 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 CT009600.2-201ENSMUST00000226638 481 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm5594-201ENSMUST00000172712 1429 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm23164-201ENSMUST00000175084 111 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Mir1251-201ENSMUST00000175486 84 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Dlx6os1-204ENSMUST00000184182 146 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm9722-201ENSMUST00000194568 802 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm45409-201ENSMUST00000211486 252 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
Col6a3E9PWQ3 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC4.78□□□□□ -1.65
Col6a3E9PWQ3 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm3835-201ENSMUST00000120752 403 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm24503-201ENSMUST00000158454 135 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm23638-201ENSMUST00000175073 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm23158-201ENSMUST00000175076 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm22907-201ENSMUST00000175198 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm22625-201ENSMUST00000175382 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm22875-201ENSMUST00000175449 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm27857-201ENSMUST00000176930 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm26268-201ENSMUST00000177685 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm23681-201ENSMUST00000178821 126 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm18258-201ENSMUST00000210413 542 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm6104-201ENSMUST00000078030 603 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Mir194-1-201ENSMUST00000083647 67 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm37079-201ENSMUST00000194114 2135 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm15783-201ENSMUST00000117521 633 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm13162-201ENSMUST00000121481 454 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm22536-201ENSMUST00000158171 134 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm44412-201ENSMUST00000203018 294 ntBASIC4.77□□□□□ -1.65
Col6a3E9PWQ3 Gm45796-201ENSMUST00000212483 114 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms