Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm10042-201ENSMUST00000079884 78 ntBASIC4.84□□□□□ -1.64
Cdh23Q99PF4 Gm26330-201ENSMUST00000082817 104 ntBASIC4.84□□□□□ -1.64
Cdh23Q99PF4 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm37834-201ENSMUST00000194517 3035 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm24314-201ENSMUST00000158274 123 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm38201-201ENSMUST00000192143 387 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Prpf8-202ENSMUST00000102510 7249 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm11406-201ENSMUST00000117418 484 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm14706-201ENSMUST00000117744 255 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Cdh23Q99PF4 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 E230020D15Rik-201ENSMUST00000208097 5899 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm27033-201ENSMUST00000183226 544 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 AC164437.5-201ENSMUST00000227235 4414 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm14103-201ENSMUST00000119075 366 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm37243-201ENSMUST00000193407 595 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm45171-201ENSMUST00000206360 736 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm5548-201ENSMUST00000055878 397 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Cdh23Q99PF4 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.82□□□□□ -1.64
Cdh23Q99PF4 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Ccnb2-ps-202ENSMUST00000170898 2296 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm24224-201ENSMUST00000158828 258 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm19134-201ENSMUST00000221203 487 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 AC141425.1-201ENSMUST00000224989 265 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm25376-201ENSMUST00000104340 133 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Snora64-201ENSMUST00000104521 134 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm12340-201ENSMUST00000121617 462 ntBASIC4.81□□□□□ -1.64
Cdh23Q99PF4 Gm10444-201ENSMUST00000126708 148 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms