Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdk5rap3Q99LM2 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdk5rap3Q99LM2 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdk5rap3Q99LM2 AC112274.1-201ENSMUST00000218957 4274 ntBASIC5.34□□□□□ -1.55
Cdk5rap3Q99LM2 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Cdk5rap3Q99LM2 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdk5rap3Q99LM2 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdk5rap3Q99LM2 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdk5rap3Q99LM2 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm38368-201ENSMUST00000193181 1335 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm15981-201ENSMUST00000119196 457 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm13484-201ENSMUST00000120738 412 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm22885-201ENSMUST00000157410 107 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm6632-201ENSMUST00000168425 954 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm28859-201ENSMUST00000186650 616 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm18330-201ENSMUST00000199246 547 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm2645-201ENSMUST00000223516 547 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Snora44-201ENSMUST00000082670 129 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdk5rap3Q99LM2 Il6-203ENSMUST00000199183 2343 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm11486-201ENSMUST00000107322 478 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm6134-201ENSMUST00000117265 171 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm13579-201ENSMUST00000118519 517 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm15530-201ENSMUST00000122206 555 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Mir6417-201ENSMUST00000183815 116 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Mir6244-201ENSMUST00000184156 117 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Mir6398-201ENSMUST00000184541 102 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm37884-201ENSMUST00000191857 818 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm43093-201ENSMUST00000202439 1213 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm45185-201ENSMUST00000207556 404 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm6477-201ENSMUST00000217098 764 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm25260-201ENSMUST00000083053 134 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Mir129-1-201ENSMUST00000083535 73 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Gm38101-201ENSMUST00000193484 3557 ntBASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Cdk5rap3Q99LM2 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms