Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Gm43121-201ENSMUST00000199065 1305 ntBASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Gm13928-201ENSMUST00000120326 1732 ntBASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC4.89□□□□□ -1.63
Lsm1Q8VC85 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm13195-201ENSMUST00000117229 261 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm12717-201ENSMUST00000118427 983 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm15267-201ENSMUST00000120888 464 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm12005-201ENSMUST00000121451 379 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm26490-201ENSMUST00000157879 140 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm23965-201ENSMUST00000157969 142 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm24944-201ENSMUST00000158330 128 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm26731-201ENSMUST00000180683 543 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm27160-201ENSMUST00000184837 199 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm34768-201ENSMUST00000193884 565 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm37173-201ENSMUST00000194498 1017 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm29813-201ENSMUST00000195856 447 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm43344-201ENSMUST00000198723 1229 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm272-201ENSMUST00000222073 919 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 AC129085.4-201ENSMUST00000224536 570 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Pth-201ENSMUST00000079793 710 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm25818-201ENSMUST00000083282 164 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm37726-201ENSMUST00000193246 3886 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm37514-201ENSMUST00000194512 2753 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm43009-201ENSMUST00000199979 3566 ntBASIC4.88□□□□□ -1.63
Lsm1Q8VC85 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Lsm1Q8VC85 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm38243-201ENSMUST00000194737 1567 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm24429-201ENSMUST00000104076 132 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm12039-201ENSMUST00000118219 180 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm11742-201ENSMUST00000119903 233 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm15803-201ENSMUST00000120118 394 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm12074-201ENSMUST00000120189 219 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm23030-201ENSMUST00000158004 273 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Mir7072-201ENSMUST00000184542 60 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm28967-201ENSMUST00000187351 281 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm37882-201ENSMUST00000195254 196 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm42542-201ENSMUST00000197978 268 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm9332-201ENSMUST00000198431 730 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm38670-201ENSMUST00000199248 77 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm45200-201ENSMUST00000207434 919 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm44571-201ENSMUST00000208092 533 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm45485-201ENSMUST00000211229 357 ntBASIC4.87□□□□□ -1.63
Lsm1Q8VC85 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms