Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm23796-201ENSMUST00000084011 160 ntBASIC6.1□□□□□ -1.43
Syne4Q8CII8 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.1□□□□□ -1.43
Syne4Q8CII8 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.1□□□□□ -1.43
Syne4Q8CII8 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Syne4Q8CII8 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm12586-201ENSMUST00000117328 1316 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 AC134860.3-201ENSMUST00000223564 1300 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm11561-201ENSMUST00000117429 417 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm11233-201ENSMUST00000122357 634 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm38040-201ENSMUST00000193505 225 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Rnu3a-202ENSMUST00000196710 213 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm44074-201ENSMUST00000204562 337 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm22826-201ENSMUST00000083774 165 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Rnu3a-201ENSMUST00000083936 214 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 Trim6-201ENSMUST00000098180 3827 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
Syne4Q8CII8 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.09□□□□□ -1.43
Syne4Q8CII8 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.09□□□□□ -1.44
Syne4Q8CII8 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Syne4Q8CII8 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm37964-201ENSMUST00000192459 4905 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm22020-201ENSMUST00000104358 136 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm13679-201ENSMUST00000118678 484 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm14125-202ENSMUST00000120921 756 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm16129-201ENSMUST00000152628 486 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm24002-201ENSMUST00000158456 104 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm16563-201ENSMUST00000162673 423 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm19200-201ENSMUST00000182579 1001 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm43390-201ENSMUST00000196614 421 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm2142-201ENSMUST00000197899 589 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm45422-201ENSMUST00000211476 246 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm24763-201ENSMUST00000083688 190 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm24917-201ENSMUST00000083935 104 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.08□□□□□ -1.44
Syne4Q8CII8 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Syne4Q8CII8 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms