Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm42799-201ENSMUST00000201331 328 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 AC165106.1-201ENSMUST00000227580 408 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Ear14-201ENSMUST00000049559 468 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gm22810-201ENSMUST00000082741 158 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gm24695-201ENSMUST00000083877 83 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Trim47Q8C0E3 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
Trim47Q8C0E3 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.27□□□□□ -1.24
Trim47Q8C0E3 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm11799-201ENSMUST00000116110 460 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm14867-201ENSMUST00000120156 866 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm2986-201ENSMUST00000121603 382 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm8648-201ENSMUST00000122457 221 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm20673-201ENSMUST00000177167 430 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm27602-201ENSMUST00000183861 111 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm27970-201ENSMUST00000184854 407 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm412-201ENSMUST00000193360 948 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm6510-201ENSMUST00000195916 574 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm45700-201ENSMUST00000205866 347 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm19140-201ENSMUST00000209790 421 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm8748-201ENSMUST00000211125 587 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm7413-201ENSMUST00000219498 462 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 AC164618.1-201ENSMUST00000225769 592 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 AC154484.2-201ENSMUST00000228359 818 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 AC116557.1-201ENSMUST00000219494 1521 ntBASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Trim47Q8C0E3 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm6215-201ENSMUST00000119297 1386 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm7905-201ENSMUST00000119933 1386 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm6207-201ENSMUST00000120075 1386 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm6228-201ENSMUST00000178856 1386 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm6221-201ENSMUST00000180064 1386 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm11271-201ENSMUST00000116054 440 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm14772-201ENSMUST00000116562 514 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm14987-201ENSMUST00000117820 676 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm14392-201ENSMUST00000120332 401 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm11805-201ENSMUST00000121238 600 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm11965-201ENSMUST00000122017 277 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm13669-201ENSMUST00000122366 457 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm23583-201ENSMUST00000158533 289 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm11107-201ENSMUST00000165414 505 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.26□□□□□ -1.25
Trim47Q8C0E3 Gm18700-201ENSMUST00000185791 553 ntBASIC7.26□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms