Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC5.08□□□□□ -1.6
Trub1Q8C0D0 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Cnep1r1-202ENSMUST00000117775 728 ntTSL 3 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm25714-201ENSMUST00000158626 296 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm23700-201ENSMUST00000158842 102 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm4134-201ENSMUST00000173244 563 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm27492-201ENSMUST00000185194 187 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm37243-201ENSMUST00000193407 595 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm20056-201ENSMUST00000194813 519 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm18007-201ENSMUST00000205019 844 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Desi2-202ENSMUST00000069568 1193 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Mir188-201ENSMUST00000083464 68 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Mir338-201ENSMUST00000083666 98 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Trub1Q8C0D0 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Btbd35f21-201ENSMUST00000105017 1943 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Btbd35f27-201ENSMUST00000178143 1943 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Btbd35f16-201ENSMUST00000185755 1949 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm25293-201ENSMUST00000122792 285 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm17081-201ENSMUST00000167363 478 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Mir3110-201ENSMUST00000175053 80 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm44456-201ENSMUST00000196554 89 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm7825-201ENSMUST00000204046 416 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm6850-201ENSMUST00000210031 530 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 AC152979.3-201ENSMUST00000217720 479 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 AC166323.1-201ENSMUST00000217756 367 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Mir337-201ENSMUST00000083592 97 ntBASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Trub1Q8C0D0 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm12683-201ENSMUST00000117528 415 ntBASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Mir1903-201ENSMUST00000122574 80 ntBASIC5.05□□□□□ -1.6
Trub1Q8C0D0 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC5.05□□□□□ -1.6
Trub1Q8C0D0 Gm8614-201ENSMUST00000182528 978 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms