Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh19Q80TF3 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Pcdh19Q80TF3 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Pcdh19Q80TF3 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.39□□□□□ -1.39
Pcdh19Q80TF3 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm23311-201ENSMUST00000104152 134 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm13672-201ENSMUST00000117554 459 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm14769-201ENSMUST00000118590 432 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm14580-201ENSMUST00000119122 718 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm13603-201ENSMUST00000119404 83 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm15181-201ENSMUST00000120142 177 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm7071-201ENSMUST00000120458 462 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm14919-201ENSMUST00000120839 390 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm11321-201ENSMUST00000121257 902 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm25374-201ENSMUST00000158158 101 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm23542-201ENSMUST00000158208 96 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm23343-201ENSMUST00000158964 143 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm10177-201ENSMUST00000160052 444 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Ear-ps7-201ENSMUST00000161287 442 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm6900-201ENSMUST00000178971 342 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Mir6244-201ENSMUST00000184156 117 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm27348-201ENSMUST00000184511 170 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm18700-201ENSMUST00000185791 553 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm28418-201ENSMUST00000186179 423 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm28665-201ENSMUST00000189269 670 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm37586-201ENSMUST00000193654 204 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm5694-201ENSMUST00000195648 641 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm42465-201ENSMUST00000197036 492 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm43675-201ENSMUST00000199468 1184 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm44163-201ENSMUST00000205140 475 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm45448-201ENSMUST00000211739 209 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 AC124433.2-201ENSMUST00000223867 291 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm26442-201ENSMUST00000082588 153 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm22581-201ENSMUST00000083735 136 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Defa-ps18-201ENSMUST00000098889 371 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdh19Q80TF3 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Gm3665-201ENSMUST00000177214 2461 ntBASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC6.37□□□□□ -1.39
Pcdh19Q80TF3 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms