Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm45845-201ENSMUST00000207326 582 ntBASIC5.71□□□□□ -1.5
CiitaP79621 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.71□□□□□ -1.5
CiitaP79621 CT030030.1-201ENSMUST00000218809 152 ntBASIC5.71□□□□□ -1.5
CiitaP79621 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Gm18247-201ENSMUST00000222937 601 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Olfr480-201ENSMUST00000071658 1029 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CiitaP79621 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.71□□□□□ -1.5
CiitaP79621 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CiitaP79621 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CiitaP79621 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Gm23274-201ENSMUST00000104056 130 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Gm22468-201ENSMUST00000116680 120 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm26248-201ENSMUST00000116700 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm26137-201ENSMUST00000116701 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm26190-201ENSMUST00000116704 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24617-201ENSMUST00000116705 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm25778-201ENSMUST00000116713 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm25774-201ENSMUST00000116717 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm22102-201ENSMUST00000116730 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm23177-201ENSMUST00000116784 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24193-201ENSMUST00000116801 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24744-201ENSMUST00000116833 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24427-201ENSMUST00000116896 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm22346-201ENSMUST00000116918 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm23606-201ENSMUST00000116938 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm22029-201ENSMUST00000116940 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm26298-201ENSMUST00000116956 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm23844-201ENSMUST00000116959 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24484-201ENSMUST00000117009 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm25347-201ENSMUST00000117026 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm22112-201ENSMUST00000117032 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.7□□□□□ -1.5
CiitaP79621 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Gm26350-201ENSMUST00000157531 288 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CiitaP79621 Gm22991-201ENSMUST00000178126 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm25754-201ENSMUST00000178653 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm22419-201ENSMUST00000178780 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24802-201ENSMUST00000178897 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm25208-201ENSMUST00000178964 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm24567-201ENSMUST00000179294 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm23943-201ENSMUST00000179712 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm25228-201ENSMUST00000180121 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm23304-201ENSMUST00000180209 121 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Dlx6os1-204ENSMUST00000184182 146 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.7□□□□□ -1.5
CiitaP79621 Gm21742-201ENSMUST00000189352 548 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.7□□□□□ -1.5
CiitaP79621 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.7□□□□□ -1.5
CiitaP79621 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC5.7□□□□□ -1.5
CiitaP79621 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.7□□□□□ -1.5
CiitaP79621 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CiitaP79621 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CiitaP79621 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CiitaP79621 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CiitaP79621 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
CiitaP79621 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CiitaP79621 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CiitaP79621 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CiitaP79621 Gm24170-201ENSMUST00000104124 133 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.69□□□□□ -1.5
CiitaP79621 Gm22194-201ENSMUST00000116869 95 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm14885-201ENSMUST00000117969 496 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm15791-201ENSMUST00000120365 319 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm13460-201ENSMUST00000121274 353 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm7973-201ENSMUST00000122107 488 ntBASIC5.69□□□□□ -1.5
CiitaP79621 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms