Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm11878-201ENSMUST00000117908 400 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm7079-201ENSMUST00000119726 171 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.96□□□□□ -1.62
Sox3P53784 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Sox3P53784 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sox3P53784 Gm22367-201ENSMUST00000178930 132 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm21816-201ENSMUST00000179255 360 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Mir6412-201ENSMUST00000184477 97 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.96□□□□□ -1.62
Sox3P53784 Gm29332-201ENSMUST00000190829 227 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm9173-201ENSMUST00000198054 400 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm43629-201ENSMUST00000201782 704 ntBASIC4.96□□□□□ -1.62
Sox3P53784 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm45700-201ENSMUST00000205866 347 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Gm2059-201ENSMUST00000212025 287 ntBASIC4.96□□□□□ -1.62
Sox3P53784 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.96□□□□□ -1.62
Sox3P53784 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.96□□□□□ -1.62
Sox3P53784 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Sox3P53784 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.96□□□□□ -1.62
Sox3P53784 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC4.96□□□□□ -1.62
Sox3P53784 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Sox3P53784 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Sox3P53784 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Gm37217-201ENSMUST00000194017 3521 ntBASIC4.96□□□□□ -1.62
Sox3P53784 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sox3P53784 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 Gm23692-201ENSMUST00000101881 160 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Mir292-201ENSMUST00000104847 82 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Sox3P53784 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gm14985-201ENSMUST00000118693 786 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.95□□□□□ -1.62
Sox3P53784 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.95□□□□□ -1.62
Sox3P53784 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gm23964-201ENSMUST00000157966 107 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm25846-201ENSMUST00000158013 135 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gm27834-201ENSMUST00000183427 125 ntBASIC4.95□□□□□ -1.62
Sox3P53784 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm37973-201ENSMUST00000195767 1289 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm44281-201ENSMUST00000203090 166 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm44214-201ENSMUST00000204153 606 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.95□□□□□ -1.62
Sox3P53784 Gm3189-201ENSMUST00000205595 832 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm19880-201ENSMUST00000207731 318 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC4.95□□□□□ -1.62
Sox3P53784 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Desi2-202ENSMUST00000069568 1193 ntBASIC4.95□□□□□ -1.62
Sox3P53784 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sox3P53784 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Sox3P53784 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Sox3P53784 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Sox3P53784 Gm42923-201ENSMUST00000198438 2896 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Sox3P53784 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Gm22020-201ENSMUST00000104358 136 ntBASIC4.94□□□□□ -1.62
Sox3P53784 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Sox3P53784 Gm23839-201ENSMUST00000116957 109 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms