Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC7.62□□□□□ -1.19
Cux1P53564 n-R5s85-201ENSMUST00000083453 113 ntBASIC7.62□□□□□ -1.19
Cux1P53564 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Cux1P53564 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
Cux1P53564 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cux1P53564 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cux1P53564 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cux1P53564 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC7.61□□□□□ -1.19
Cux1P53564 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Cux1P53564 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Cux1P53564 Gm14304-201ENSMUST00000117272 446 ntBASIC7.61□□□□□ -1.19
Cux1P53564 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC7.61□□□□□ -1.19
Cux1P53564 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cux1P53564 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC7.61□□□□□ -1.19
Cux1P53564 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Cux1P53564 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Cux1P53564 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Cux1P53564 Gm4263-201ENSMUST00000220693 1101 ntBASIC7.61□□□□□ -1.19
Cux1P53564 AC158511.1-201ENSMUST00000223622 764 ntBASIC7.61□□□□□ -1.19
Cux1P53564 CT025552.2-201ENSMUST00000225497 317 ntBASIC7.61□□□□□ -1.19
Cux1P53564 Gm6863-201ENSMUST00000052882 636 ntBASIC7.61□□□□□ -1.19
Cux1P53564 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Cux1P53564 AW046200-203ENSMUST00000211787 2479 ntBASIC7.61□□□□□ -1.19
Cux1P53564 Gm4541-201ENSMUST00000208901 1848 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Cux1P53564 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC7.6□□□□□ -1.19
Cux1P53564 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Gm15779-201ENSMUST00000117470 412 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Gm13172-201ENSMUST00000118685 256 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Gm16106-201ENSMUST00000119187 294 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Gm17152-201ENSMUST00000172430 535 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Gm20428-201ENSMUST00000174365 283 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Mir3471-2-201ENSMUST00000174896 102 ntBASIC7.6□□□□□ -1.19
Cux1P53564 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Gm18382-201ENSMUST00000194394 582 ntBASIC7.6□□□□□ -1.19
Cux1P53564 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Gm45910-201ENSMUST00000212493 1003 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC7.6□□□□□ -1.19
Cux1P53564 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 AC125484.1-201ENSMUST00000223218 234 ntBASIC7.6□□□□□ -1.19
Cux1P53564 AC164618.1-201ENSMUST00000225769 592 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Cux1P53564 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Gm37226-201ENSMUST00000191644 3255 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Gm37593-201ENSMUST00000191669 3254 ntBASIC7.6□□□□□ -1.19
Cux1P53564 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Cux1P53564 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Cux1P53564 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.59□□□□□ -1.19
Cux1P53564 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cux1P53564 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cux1P53564 Gm43953-201ENSMUST00000203709 2867 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Cux1P53564 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cux1P53564 Gm15752-201ENSMUST00000117427 394 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC7.59□□□□□ -1.19
Cux1P53564 Gm9569-201ENSMUST00000187492 787 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm43144-201ENSMUST00000198256 485 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm17951-201ENSMUST00000198536 496 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm19131-201ENSMUST00000203408 789 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm44402-201ENSMUST00000203677 238 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm45343-201ENSMUST00000210452 828 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
Cux1P53564 AC121137.1-201ENSMUST00000225272 602 ntBASIC7.59□□□□□ -1.19
Cux1P53564 AC154335.2-201ENSMUST00000225916 638 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Anxa13-202ENSMUST00000227274 1201 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Cux1P53564 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cux1P53564 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Cux1P53564 AC151904.4-201ENSMUST00000219868 1319 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Gm37357-201ENSMUST00000192386 3123 ntBASIC7.59□□□□□ -1.19
Cux1P53564 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cux1P53564 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
Cux1P53564 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cux1P53564 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cux1P53564 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC7.58□□□□□ -1.2
Cux1P53564 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cux1P53564 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Cux1P53564 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cux1P53564 Gm13000-201ENSMUST00000120937 496 ntBASIC7.58□□□□□ -1.2
Cux1P53564 Gm25861-201ENSMUST00000158251 109 ntBASIC7.58□□□□□ -1.2
Cux1P53564 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Cux1P53564 Gm28685-201ENSMUST00000187545 1101 ntBASIC7.58□□□□□ -1.2
Cux1P53564 Gm8861-201ENSMUST00000196346 832 ntBASIC7.58□□□□□ -1.2
Cux1P53564 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC7.58□□□□□ -1.2
Cux1P53564 Gm4602-201ENSMUST00000203198 308 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms