Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm33242-201ENSMUST00000212130 1057 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 CU024910.1-201ENSMUST00000214310 418 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC119894.1-201ENSMUST00000220399 350 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC134439.1-201ENSMUST00000220923 600 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm8526-201ENSMUST00000079153 475 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Olfr878-201ENSMUST00000086061 1065 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC115760.1-201ENSMUST00000225160 1327 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm18163-201ENSMUST00000197877 1643 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 AC139754.3-201ENSMUST00000220444 1627 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Gm44535-201ENSMUST00000208889 3136 ntBASIC4.35□□□□□ -1.71
Nkx2-1P50220 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Nkx2-1P50220 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Vmn2r-ps102-201ENSMUST00000222577 2203 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm22374-201ENSMUST00000104583 132 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm22709-201ENSMUST00000116893 111 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm12467-201ENSMUST00000117625 745 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm11483-201ENSMUST00000119839 247 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm7350-201ENSMUST00000120964 636 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm3160-201ENSMUST00000128343 607 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm24435-201ENSMUST00000157886 110 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm18560-201ENSMUST00000173463 1123 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm26993-201ENSMUST00000182766 789 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm27210-201ENSMUST00000184263 402 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm43516-201ENSMUST00000196891 322 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm29745-201ENSMUST00000198005 687 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm2040-201ENSMUST00000202979 289 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm43973-201ENSMUST00000203562 210 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 AC102287.1-201ENSMUST00000211412 454 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm18587-201ENSMUST00000213736 841 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm46996-201ENSMUST00000220924 408 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 AC156559.2-201ENSMUST00000224403 384 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm22456-201ENSMUST00000082578 125 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm45172-201ENSMUST00000206054 1301 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm37965-201ENSMUST00000195304 1362 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm44424-201ENSMUST00000203438 1826 ntBASIC4.34□□□□□ -1.71
Nkx2-1P50220 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Nkx2-1P50220 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx2-1P50220 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx2-1P50220 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
Nkx2-1P50220 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Nkx2-1P50220 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms