Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm18541-201ENSMUST00000215935 538 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm7802-201ENSMUST00000216464 262 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm7588-201ENSMUST00000216866 571 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gm19174-201ENSMUST00000216944 956 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC4.1□□□□□ -1.75
Sdc1P18828 AV026068-231ENSMUST00000225862 482 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 AC122393.2-201ENSMUST00000226404 1093 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Sdc1P18828 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm23508-201ENSMUST00000083079 72 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Mir504-201ENSMUST00000093602 79 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Sdc1P18828 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Sdc1P18828 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
Sdc1P18828 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.1□□□□□ -1.75
Sdc1P18828 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.1□□□□□ -1.75
Sdc1P18828 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Sdc1P18828 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm43882-201ENSMUST00000204871 2264 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm22266-201ENSMUST00000104011 138 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm4910-201ENSMUST00000119605 366 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm25966-201ENSMUST00000157169 117 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm22519-201ENSMUST00000158270 178 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm18343-201ENSMUST00000172802 604 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm4831-201ENSMUST00000174626 594 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm3650-201ENSMUST00000180600 747 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.09□□□□□ -1.75
Sdc1P18828 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm2429-201ENSMUST00000194635 586 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm36997-201ENSMUST00000195090 707 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm37908-201ENSMUST00000195828 470 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm42464-202ENSMUST00000198111 774 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm44252-201ENSMUST00000204187 330 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm31861-201ENSMUST00000204563 672 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC4.09□□□□□ -1.75
Sdc1P18828 Gm45498-201ENSMUST00000210346 283 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 AC142273.1-201ENSMUST00000213723 673 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 AC153557.1-201ENSMUST00000217697 403 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 AC157515.1-201ENSMUST00000220953 450 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 AC140930.1-201ENSMUST00000221889 389 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Gm2645-201ENSMUST00000223516 547 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 AC166369.2-201ENSMUST00000228403 308 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 AC164295.2-201ENSMUST00000228539 757 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Sdc1P18828 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Sdc1P18828 AC170999.1-201ENSMUST00000226359 1585 ntBASIC4.09□□□□□ -1.75
Sdc1P18828 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Sdc1P18828 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Sdc1P18828 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.09□□□□□ -1.76
Sdc1P18828 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Sdc1P18828 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.09□□□□□ -1.76
Sdc1P18828 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.09□□□□□ -1.76
Sdc1P18828 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.09□□□□□ -1.76
Sdc1P18828 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm6893-201ENSMUST00000118385 522 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm13118-201ENSMUST00000120402 549 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm8761-201ENSMUST00000121507 955 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Gm25843-201ENSMUST00000122582 314 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm23888-201ENSMUST00000122690 253 ntBASIC4.08□□□□□ -1.76
Sdc1P18828 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Sdc1P18828 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC4.08□□□□□ -1.76
Sdc1P18828 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Sdc1P18828 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Sdc1P18828 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms