Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Col1a1P11087 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col1a1P11087 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col1a1P11087 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col1a1P11087 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.85□□□□□ -1.47
Col1a1P11087 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Col1a1P11087 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.85□□□□□ -1.47
Col1a1P11087 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col1a1P11087 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Gm7363-201ENSMUST00000119883 399 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Gm26828-201ENSMUST00000180640 172 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Gm21070-201ENSMUST00000182425 985 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Mir3620-201ENSMUST00000184710 61 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.84□□□□□ -1.47
Col1a1P11087 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Gm43144-201ENSMUST00000198256 485 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.84□□□□□ -1.47
Col1a1P11087 AC132384.6-201ENSMUST00000218976 1206 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Gm26330-201ENSMUST00000082817 104 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Col1a1P11087 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Col1a1P11087 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Col1a1P11087 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Col1a1P11087 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.84□□□□□ -1.47
Col1a1P11087 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Col1a1P11087 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Col1a1P11087 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Col1a1P11087 Gm11878-201ENSMUST00000117908 400 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm12717-201ENSMUST00000118427 983 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm14732-201ENSMUST00000121372 545 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm3084-201ENSMUST00000169967 598 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm27818-201ENSMUST00000184536 159 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm19131-201ENSMUST00000203408 789 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm44402-201ENSMUST00000203677 238 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.83□□□□□ -1.48
Col1a1P11087 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Col1a1P11087 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col1a1P11087 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Col1a1P11087 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Col1a1P11087 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Col1a1P11087 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
Col1a1P11087 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col1a1P11087 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Col1a1P11087 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
Col1a1P11087 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Col1a1P11087 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm6988-201ENSMUST00000222676 375 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 CT009600.2-201ENSMUST00000226638 481 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.83□□□□□ -1.48
Col1a1P11087 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col1a1P11087 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 AW046200-203ENSMUST00000211787 2479 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Gm18508-201ENSMUST00000215790 1642 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm12186-201ENSMUST00000119050 945 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Gm13737-201ENSMUST00000119793 232 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col1a1P11087 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.82□□□□□ -1.48
Col1a1P11087 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.82□□□□□ -1.48
Col1a1P11087 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.82□□□□□ -1.48
Col1a1P11087 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms