Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm43169-201ENSMUST00000199544 4734 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm12713-201ENSMUST00000118404 764 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm11869-201ENSMUST00000118701 329 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm11533-201ENSMUST00000120287 477 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm7973-201ENSMUST00000122107 488 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm12778-201ENSMUST00000122341 333 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm25807-201ENSMUST00000122783 305 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm25550-201ENSMUST00000158079 128 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm25435-201ENSMUST00000158277 267 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm24300-201ENSMUST00000177809 109 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm24017-201ENSMUST00000178726 109 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm23952-201ENSMUST00000179380 109 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm27185-201ENSMUST00000184296 247 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm29464-201ENSMUST00000187692 513 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm43350-201ENSMUST00000196382 711 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm20940-201ENSMUST00000197308 360 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm6850-201ENSMUST00000210031 530 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 AC151904.5-201ENSMUST00000218975 549 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm5928-201ENSMUST00000221839 466 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 CT009711.2-201ENSMUST00000225352 934 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 AC131033.1-201ENSMUST00000228223 279 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm7808-201ENSMUST00000082002 387 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm25475-201ENSMUST00000082825 180 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm23378-201ENSMUST00000082942 107 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Mir3068-201ENSMUST00000083004 136 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm5454-201ENSMUST00000052030 1453 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm9930-201ENSMUST00000066742 3151 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Pcdh1F7BJK1 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms