Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm25923-201ENSMUST00000158312 138 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm29428-201ENSMUST00000190086 409 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm20789-201ENSMUST00000221002 4195 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm43211-201ENSMUST00000196901 1899 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Dcdc2a-202ENSMUST00000069614 6634 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm7808-201ENSMUST00000082002 387 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm24166-201ENSMUST00000082724 135 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm19084-201ENSMUST00000222939 1762 ntBASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Ptpn21-201ENSMUST00000085116 5696 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Tln2-201ENSMUST00000039662 8052 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col6a3E9PWQ3 Gm38026-201ENSMUST00000193284 3880 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm13815-201ENSMUST00000119963 412 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm6542-201ENSMUST00000153606 772 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm24689-201ENSMUST00000157760 104 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm4845-201ENSMUST00000179202 562 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm11270-201ENSMUST00000117685 471 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm23667-201ENSMUST00000157466 120 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm23279-201ENSMUST00000157912 97 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Mir1945-201ENSMUST00000157919 78 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm18342-201ENSMUST00000186987 694 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm19134-201ENSMUST00000221203 487 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Fam35a-206ENSMUST00000228626 3100 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm11245-201ENSMUST00000119419 1037 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm22320-201ENSMUST00000157149 312 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm10292-201ENSMUST00000183142 581 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm38270-201ENSMUST00000192721 407 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm43968-201ENSMUST00000203388 389 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Gm38189-201ENSMUST00000194495 1457 ntBASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Col6a3E9PWQ3 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.79□□□□□ -1.64
Col6a3E9PWQ3 Gm24147-201ENSMUST00000082763 144 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms