Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc9Q8VC31 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Mir680-1-201ENSMUST00000102257 109 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm15923-201ENSMUST00000119300 1169 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm16074-201ENSMUST00000119524 444 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm14679-201ENSMUST00000121536 722 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Mup-ps15-201ENSMUST00000121741 539 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm22985-201ENSMUST00000122754 116 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm26069-201ENSMUST00000157497 277 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm16147-201ENSMUST00000162143 373 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm22693-201ENSMUST00000175049 442 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm13147-202ENSMUST00000177526 1173 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm26731-201ENSMUST00000180683 543 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm8183-201ENSMUST00000183134 980 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm42983-201ENSMUST00000199879 815 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm2602-201ENSMUST00000202112 571 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm43748-201ENSMUST00000202329 1233 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 AC159252.1-201ENSMUST00000224450 553 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 AC117949.2-201ENSMUST00000225900 584 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 AC158981.3-201ENSMUST00000226844 1024 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Cma2-202ENSMUST00000228263 857 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 AC122382.2-201ENSMUST00000225128 3602 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.29□□□□□ -1.4
Ccdc9Q8VC31 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm19131-202ENSMUST00000203464 3208 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm26144-201ENSMUST00000104475 132 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm14772-201ENSMUST00000116562 514 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm14560-201ENSMUST00000118672 375 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm12379-201ENSMUST00000119607 391 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm16179-201ENSMUST00000120685 373 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm15237-201ENSMUST00000122104 469 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm25714-201ENSMUST00000158626 296 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm16134-201ENSMUST00000161714 336 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm16318-201ENSMUST00000162402 601 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm4831-201ENSMUST00000174626 594 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm21542-201ENSMUST00000182307 993 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm28926-201ENSMUST00000191063 680 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm38180-201ENSMUST00000192381 395 ntTSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm44879-201ENSMUST00000207007 503 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AV026068-216ENSMUST00000223874 328 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm24454-201ENSMUST00000083349 132 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc9Q8VC31 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms