Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm43350-201ENSMUST00000196382 711 ntBASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc88aQ5SNZ0 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc88aQ5SNZ0 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc88aQ5SNZ0 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm23837-201ENSMUST00000122656 286 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Zakit-201ENSMUST00000157677 308 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm18128-201ENSMUST00000172625 511 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Mir1957b-201ENSMUST00000184608 123 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm10048-201ENSMUST00000194196 372 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm42459-201ENSMUST00000199679 742 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm15185-201ENSMUST00000117397 746 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm13567-201ENSMUST00000118026 247 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm8145-201ENSMUST00000118220 745 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm13000-201ENSMUST00000120937 496 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm29036-201ENSMUST00000189967 877 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm28769-201ENSMUST00000190176 615 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm43929-201ENSMUST00000203025 409 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 AC125399.1-201ENSMUST00000224236 595 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc88aQ5SNZ0 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm5942-201ENSMUST00000120046 439 ntBASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm15786-201ENSMUST00000121079 450 ntBASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm13745-201ENSMUST00000121994 527 ntBASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm5699-201ENSMUST00000152491 723 ntBASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc88aQ5SNZ0 Gm25260-201ENSMUST00000083053 134 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms