Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col17a1Q07563 AC154184.1-201ENSMUST00000224375 1620 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm37926-201ENSMUST00000191922 2424 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm11617-201ENSMUST00000119609 639 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm12978-201ENSMUST00000121250 522 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Esd-ps-201ENSMUST00000170684 847 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm43814-201ENSMUST00000197851 413 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm29736-201ENSMUST00000198189 385 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Igkv8-31-201ENSMUST00000200040 372 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.12□□□□□ -1.11
Col17a1Q07563 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 n-R5s167-201ENSMUST00000083227 121 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm44424-201ENSMUST00000203438 1826 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC8.12□□□□□ -1.11
Col17a1Q07563 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.12□□□□□ -1.11
Col17a1Q07563 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm11251-201ENSMUST00000119593 2800 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col17a1Q07563 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm15752-201ENSMUST00000117427 394 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm17081-201ENSMUST00000167363 478 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm20453-201ENSMUST00000173968 226 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm17916-202ENSMUST00000187634 1187 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm37503-201ENSMUST00000192088 319 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Ighv1-28-201ENSMUST00000192987 351 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm18864-201ENSMUST00000194518 1051 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 AC120011.1-201ENSMUST00000202147 744 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm26165-201ENSMUST00000083791 138 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Gm44440-201ENSMUST00000203139 2373 ntBASIC8.11□□□□□ -1.11
Col17a1Q07563 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col17a1Q07563 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm7529-201ENSMUST00000213753 1897 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm25419-201ENSMUST00000104215 191 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm7350-201ENSMUST00000120964 636 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Llph-ps1-201ENSMUST00000121281 390 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Llph-ps2-201ENSMUST00000122000 393 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Mrgprb9-ps-201ENSMUST00000188739 892 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm6590-201ENSMUST00000203343 687 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm43130-201ENSMUST00000197721 3907 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 Gm45633-201ENSMUST00000210669 3253 ntBASIC8.1□□□□□ -1.11
Col17a1Q07563 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Col17a1Q07563 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col17a1Q07563 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm25376-201ENSMUST00000104340 133 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC8.09□□□□□ -1.11
Col17a1Q07563 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col17a1Q07563 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC8.09□□□□□ -1.11
Col17a1Q07563 Ang-ps2-201ENSMUST00000178173 433 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm20574-201ENSMUST00000182867 917 ntBASIC8.09□□□□□ -1.11
Col17a1Q07563 Gm29479-201ENSMUST00000190352 455 ntBASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms