Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm12413-201ENSMUST00000121508 312 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm23993-201ENSMUST00000157478 144 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Scarna6-201ENSMUST00000158656 265 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CiitaP79621 Gm28353-201ENSMUST00000186482 570 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Gm28533-201ENSMUST00000186741 570 ntBASIC5.73□□□□□ -1.49
CiitaP79621 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.73□□□□□ -1.49
CiitaP79621 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CiitaP79621 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm31026-201ENSMUST00000198762 821 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CiitaP79621 Gm43930-201ENSMUST00000203868 845 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm45072-201ENSMUST00000208673 929 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm18924-201ENSMUST00000211929 316 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm46191-201ENSMUST00000218899 433 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.73□□□□□ -1.49
CiitaP79621 AC156576.2-202ENSMUST00000222525 411 ntBASIC5.73□□□□□ -1.49
CiitaP79621 AC153153.2-201ENSMUST00000223572 411 ntBASIC5.73□□□□□ -1.49
CiitaP79621 AC158388.1-201ENSMUST00000225441 256 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CiitaP79621 Gm23623-201ENSMUST00000082461 107 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Mir20a-201ENSMUST00000083508 107 ntBASIC5.73□□□□□ -1.49
CiitaP79621 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CiitaP79621 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CiitaP79621 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
CiitaP79621 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC5.73□□□□□ -1.49
CiitaP79621 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.72□□□□□ -1.49
CiitaP79621 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CiitaP79621 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CiitaP79621 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CiitaP79621 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.72□□□□□ -1.49
CiitaP79621 AC117608.2-201ENSMUST00000224124 1363 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CiitaP79621 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CiitaP79621 Gm11550-201ENSMUST00000118210 699 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm17014-201ENSMUST00000120765 168 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm13077-201ENSMUST00000121941 484 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Gm8669-201ENSMUST00000183839 945 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC5.72□□□□□ -1.49
CiitaP79621 Gm42625-201ENSMUST00000198611 922 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm5284-201ENSMUST00000199053 903 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm4321-201ENSMUST00000200520 442 ntBASIC5.72□□□□□ -1.49
CiitaP79621 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gm44849-201ENSMUST00000207595 484 ntBASIC5.72□□□□□ -1.49
CiitaP79621 AC154452.1-201ENSMUST00000225819 241 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CiitaP79621 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CiitaP79621 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CiitaP79621 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CiitaP79621 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CiitaP79621 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.72□□□□□ -1.49
CiitaP79621 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CiitaP79621 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.72□□□□□ -1.49
CiitaP79621 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CiitaP79621 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CiitaP79621 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CiitaP79621 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CiitaP79621 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm5383-201ENSMUST00000121177 617 ntBASIC5.71□□□□□ -1.5
CiitaP79621 n-R5s98-201ENSMUST00000122549 119 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.71□□□□□ -1.5
CiitaP79621 Gm5699-201ENSMUST00000152491 723 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Gm26925-201ENSMUST00000182470 957 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Gm5285-201ENSMUST00000193089 666 ntBASIC5.71□□□□□ -1.5
CiitaP79621 Gm19080-201ENSMUST00000196082 550 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms