Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NcanP55066 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
NcanP55066 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.6□□□□□ -1.51
NcanP55066 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Gm15333-201ENSMUST00000118825 364 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm6884-201ENSMUST00000119318 615 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC5.6□□□□□ -1.51
NcanP55066 Gm23993-201ENSMUST00000157478 144 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm22730-201ENSMUST00000158085 171 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm26005-201ENSMUST00000158802 134 ntBASIC5.6□□□□□ -1.51
NcanP55066 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
NcanP55066 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NcanP55066 Gm18128-201ENSMUST00000172625 511 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.6□□□□□ -1.51
NcanP55066 Gm43157-201ENSMUST00000198223 412 ntBASIC5.6□□□□□ -1.51
NcanP55066 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC5.6□□□□□ -1.51
NcanP55066 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.6□□□□□ -1.51
NcanP55066 Gm7040-201ENSMUST00000223271 443 ntBASIC5.6□□□□□ -1.51
NcanP55066 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NcanP55066 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
NcanP55066 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NcanP55066 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.6□□□□□ -1.51
NcanP55066 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
NcanP55066 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
NcanP55066 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC5.6□□□□□ -1.51
NcanP55066 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.59□□□□□ -1.51
NcanP55066 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.59□□□□□ -1.51
NcanP55066 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.59□□□□□ -1.51
NcanP55066 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NcanP55066 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NcanP55066 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm16149-201ENSMUST00000117631 309 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm13469-201ENSMUST00000118231 350 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm12322-201ENSMUST00000121605 389 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm22214-201ENSMUST00000157563 172 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm27414-201ENSMUST00000185033 381 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NcanP55066 Gm8282-201ENSMUST00000187559 483 ntBASIC5.59□□□□□ -1.51
NcanP55066 Vmn1r82-202ENSMUST00000191002 918 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm36994-201ENSMUST00000192941 492 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.59□□□□□ -1.51
NcanP55066 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.59□□□□□ -1.51
NcanP55066 Gm44984-201ENSMUST00000207802 394 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm3816-201ENSMUST00000209803 433 ntBASIC5.59□□□□□ -1.51
NcanP55066 Gm18507-201ENSMUST00000218855 525 ntBASIC5.59□□□□□ -1.51
NcanP55066 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.59□□□□□ -1.51
NcanP55066 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.59□□□□□ -1.51
NcanP55066 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
NcanP55066 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
NcanP55066 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
NcanP55066 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
NcanP55066 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NcanP55066 Gm42508-201ENSMUST00000199972 3292 ntBASIC5.59□□□□□ -1.52
NcanP55066 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.59□□□□□ -1.52
NcanP55066 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.59□□□□□ -1.52
NcanP55066 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NcanP55066 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NcanP55066 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NcanP55066 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.59□□□□□ -1.52
NcanP55066 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
NcanP55066 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.59□□□□□ -1.52
NcanP55066 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
NcanP55066 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 CT009480.3-201ENSMUST00000224051 3032 ntBASIC5.58□□□□□ -1.52
NcanP55066 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
NcanP55066 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.58□□□□□ -1.52
NcanP55066 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.58□□□□□ -1.52
NcanP55066 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.58□□□□□ -1.52
NcanP55066 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NcanP55066 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
NcanP55066 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.58□□□□□ -1.52
NcanP55066 Mir1903-201ENSMUST00000122574 80 ntBASIC5.58□□□□□ -1.52
NcanP55066 n-R5s30-201ENSMUST00000122624 122 ntBASIC5.58□□□□□ -1.52
NcanP55066 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.58□□□□□ -1.52
NcanP55066 Gm23673-201ENSMUST00000157474 298 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms