Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox1P53783 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox1P53783 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.51□□□□□ -1.37
Sox1P53783 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox1P53783 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox1P53783 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.51□□□□□ -1.37
Sox1P53783 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox1P53783 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox1P53783 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Gm42661-201ENSMUST00000202364 1442 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm42561-201ENSMUST00000202563 1442 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox1P53783 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Gm6820-201ENSMUST00000188803 2173 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Gm43873-201ENSMUST00000204505 3938 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm26002-201ENSMUST00000101915 107 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm22103-201ENSMUST00000116733 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm26475-201ENSMUST00000116769 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm23620-201ENSMUST00000116812 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm25042-201ENSMUST00000116856 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm25540-201ENSMUST00000116880 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm7485-201ENSMUST00000119502 1109 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm15060-201ENSMUST00000119550 948 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm15331-201ENSMUST00000120225 385 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm11522-201ENSMUST00000120533 176 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm14162-201ENSMUST00000121985 601 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm23852-201ENSMUST00000158376 77 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.5□□□□□ -1.37
Sox1P53783 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Gm24303-201ENSMUST00000178237 126 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.5□□□□□ -1.37
Sox1P53783 Gm23550-201ENSMUST00000179003 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm25123-201ENSMUST00000179154 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm25353-201ENSMUST00000179366 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm22992-201ENSMUST00000179496 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Snord116l12-201ENSMUST00000179816 94 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm25892-201ENSMUST00000179867 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm24092-201ENSMUST00000180257 121 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm21735-201ENSMUST00000190360 696 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm20926-201ENSMUST00000194457 696 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm37719-201ENSMUST00000194615 292 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm43018-201ENSMUST00000198075 1275 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC6.5□□□□□ -1.37
Sox1P53783 Gm7039-201ENSMUST00000205138 346 ntBASIC6.5□□□□□ -1.37
Sox1P53783 AC134334.1-201ENSMUST00000214277 255 ntBASIC6.5□□□□□ -1.37
Sox1P53783 AC154390.1-201ENSMUST00000225629 277 ntBASIC6.5□□□□□ -1.37
Sox1P53783 AC124549.1-201ENSMUST00000225912 333 ntBASIC6.5□□□□□ -1.37
Sox1P53783 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sox1P53783 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sox1P53783 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sox1P53783 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox1P53783 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC6.5□□□□□ -1.37
Sox1P53783 Gm6757-201ENSMUST00000189810 1706 ntBASIC6.5□□□□□ -1.37
Sox1P53783 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
Sox1P53783 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.5□□□□□ -1.37
Sox1P53783 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sox1P53783 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sox1P53783 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm42503-201ENSMUST00000199080 3706 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.49□□□□□ -1.37
Sox1P53783 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Sox1P53783 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Sox1P53783 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox1P53783 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Sox1P53783 Gm24886-201ENSMUST00000104384 123 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm14769-201ENSMUST00000118590 432 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm12229-201ENSMUST00000120487 468 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm14620-201ENSMUST00000120656 383 ntBASIC6.49□□□□□ -1.37
Sox1P53783 Gm11759-201ENSMUST00000121742 464 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms