Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm19921-201ENSMUST00000210505 703 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 AC166358.7-201ENSMUST00000221132 108 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 AC125543.5-201ENSMUST00000222799 108 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 AL591207.2-201ENSMUST00000222991 337 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 AC154481.1-201ENSMUST00000223532 331 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 AC133958.1-201ENSMUST00000227085 961 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm25929-201ENSMUST00000082784 107 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm24316-201ENSMUST00000083041 107 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Rny1-201ENSMUST00000083767 112 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 AC154270.2-201ENSMUST00000226755 2306 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Gm37364-201ENSMUST00000192533 3920 ntBASIC5.6□□□□□ -1.51
Hoxd3P09027 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Hoxd3P09027 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Hoxd3P09027 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm12511-201ENSMUST00000135987 1603 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm22834-201ENSMUST00000102021 79 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm8250-201ENSMUST00000117398 774 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm11219-201ENSMUST00000118565 358 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm5405-201ENSMUST00000120478 609 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm15538-201ENSMUST00000121410 313 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm5401-201ENSMUST00000122444 365 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm10913-201ENSMUST00000133732 463 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm11197-201ENSMUST00000145158 839 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm11507-201ENSMUST00000156462 412 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm23581-201ENSMUST00000158531 63 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Mir3078-201ENSMUST00000175231 87 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Mir378d-201ENSMUST00000184232 110 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm28094-201ENSMUST00000185262 390 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm28580-201ENSMUST00000186767 88 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxd3P09027 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm44091-201ENSMUST00000205212 649 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm29754-201ENSMUST00000206269 358 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm45246-201ENSMUST00000210820 367 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm7380-201ENSMUST00000211599 466 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm45735-201ENSMUST00000212779 319 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 AC151901.1-201ENSMUST00000218274 180 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 CT030705.2-201ENSMUST00000225301 556 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm24207-201ENSMUST00000082781 108 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Gm25853-201ENSMUST00000082793 132 ntBASIC5.59□□□□□ -1.51
Hoxd3P09027 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Hoxd3P09027 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Hoxd3P09027 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms