Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm28802-201ENSMUST00000188624 944 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm44361-201ENSMUST00000197960 94 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm42963-201ENSMUST00000202943 1217 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 AC165349.1-201ENSMUST00000217896 424 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm29809-201ENSMUST00000218423 493 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm19599-201ENSMUST00000218898 358 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 AC154532.2-201ENSMUST00000228947 598 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm3665-201ENSMUST00000177214 2461 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Vmn2r-ps51-201ENSMUST00000177271 2461 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm14415-201ENSMUST00000118260 1578 ntBASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Pcdh1F7BJK1 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm24869-201ENSMUST00000104072 128 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm15791-201ENSMUST00000120365 319 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm11252-201ENSMUST00000120572 939 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm15166-201ENSMUST00000120790 385 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm12358-201ENSMUST00000121842 520 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm9587-201ENSMUST00000172449 454 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm15257-201ENSMUST00000177680 883 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm15252-201ENSMUST00000177750 883 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm15260-201ENSMUST00000179402 883 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm19694-201ENSMUST00000192364 505 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm37399-201ENSMUST00000195224 416 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm43276-201ENSMUST00000199712 364 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm3549-201ENSMUST00000203873 794 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm8106-201ENSMUST00000213123 523 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 AC153971.2-201ENSMUST00000214553 777 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 AC145736.1-201ENSMUST00000214661 479 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm21041-201ENSMUST00000214829 823 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm31711-201ENSMUST00000220687 196 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Pcdh1F7BJK1 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms