Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm22758-201ENSMUST00000102275 96 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm24745-201ENSMUST00000157840 85 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm18802-201ENSMUST00000186270 888 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm29138-201ENSMUST00000191444 348 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm38053-201ENSMUST00000193938 160 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col4a6B1AVK5 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.19□□□□□ -1.58
Col4a6B1AVK5 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm15206-201ENSMUST00000119143 454 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm14831-201ENSMUST00000120253 409 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm13867-201ENSMUST00000120844 395 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm22343-201ENSMUST00000122648 286 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm5963-201ENSMUST00000143451 236 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm6155-201ENSMUST00000173735 341 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm4842-201ENSMUST00000183237 835 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm28615-201ENSMUST00000187527 482 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Mecom-201ENSMUST00000061088 348 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm26330-201ENSMUST00000082817 104 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm13506-201ENSMUST00000120391 1083 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm2182-201ENSMUST00000145243 663 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm27883-201ENSMUST00000183941 102 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm18177-201ENSMUST00000188373 404 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm43390-201ENSMUST00000196614 421 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Gm45722-201ENSMUST00000213075 466 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 AC166902.1-201ENSMUST00000216653 517 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 CT025552.2-201ENSMUST00000225497 317 ntBASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col4a6B1AVK5 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col4a6B1AVK5 Gm23014-201ENSMUST00000104144 130 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms