Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm4874-201ENSMUST00000203589 691 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm2011-203ENSMUST00000203750 435 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm44132-201ENSMUST00000205142 151 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC102847.2-201ENSMUST00000227799 2906 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 Tyr-201ENSMUST00000004770 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Vps53Q8CCB4 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm7171-201ENSMUST00000177413 1349 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm8980-201ENSMUST00000140232 2197 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm14756-201ENSMUST00000116395 240 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm8595-201ENSMUST00000118250 630 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm14871-201ENSMUST00000119056 194 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm13924-201ENSMUST00000119899 486 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm14601-201ENSMUST00000120892 236 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm26170-201ENSMUST00000158419 148 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm8669-201ENSMUST00000183839 945 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm37845-201ENSMUST00000194977 355 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm37908-201ENSMUST00000195828 470 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm44456-201ENSMUST00000196554 89 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 AC127302.1-201ENSMUST00000215973 1111 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm42923-201ENSMUST00000198438 2896 ntBASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Vps53Q8CCB4 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm9427-201ENSMUST00000116187 651 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm11971-201ENSMUST00000117715 288 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm12577-201ENSMUST00000119701 574 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm7670-201ENSMUST00000121272 641 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm25291-201ENSMUST00000122795 144 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm3757-201ENSMUST00000125878 675 ntBASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Olfr1134-202ENSMUST00000135875 1291 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.35□□□□□ -1.39
Vps53Q8CCB4 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms