Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim35Q8C006 n-R5s28-201ENSMUST00000082814 119 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm22830-201ENSMUST00000083772 130 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Blzf1-201ENSMUST00000027866 3948 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 AC154462.1-201ENSMUST00000228897 2260 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Gm38351-201ENSMUST00000195466 2518 ntBASIC8.27□□□□□ -1.09
Trim35Q8C006 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim35Q8C006 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim35Q8C006 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Meis1-209ENSMUST00000185131 3346 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm43099-201ENSMUST00000198943 5241 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm38264-201ENSMUST00000194850 2032 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Mir450b-201ENSMUST00000102095 82 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm22784-201ENSMUST00000104088 132 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm26012-201ENSMUST00000104411 128 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm22198-201ENSMUST00000122659 307 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm26040-201ENSMUST00000158147 161 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm5456-201ENSMUST00000170706 844 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm20702-201ENSMUST00000176181 460 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm5058-201ENSMUST00000187331 463 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm38150-201ENSMUST00000192996 452 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Ighv8-16-201ENSMUST00000199258 294 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm44431-201ENSMUST00000203500 413 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm44604-201ENSMUST00000205475 496 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm45296-201ENSMUST00000209625 205 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC8.26□□□□□ -1.09
Trim35Q8C006 AC159649.1-201ENSMUST00000220851 977 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 AC130222.1-201ENSMUST00000221198 256 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 AC158531.2-201ENSMUST00000224264 473 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim35Q8C006 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim35Q8C006 Rian-209ENSMUST00000182406 3476 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm15314-201ENSMUST00000120740 1887 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 AC158982.1-205ENSMUST00000227339 1876 ntBASIC8.26□□□□□ -1.09
Trim35Q8C006 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Zfp866-201ENSMUST00000131784 2680 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm14421-201ENSMUST00000121755 1958 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm25501-201ENSMUST00000104429 132 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm14304-201ENSMUST00000117272 446 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm14860-201ENSMUST00000120277 429 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm12486-201ENSMUST00000120887 541 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm11688-201ENSMUST00000122145 308 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim35Q8C006 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm23078-201ENSMUST00000157848 148 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm23896-201ENSMUST00000158109 130 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm16378-201ENSMUST00000179168 342 ntBASIC8.25□□□□□ -1.09
Trim35Q8C006 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms