Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm12813-201ENSMUST00000119615 902 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm7840-201ENSMUST00000122086 533 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm5834-201ENSMUST00000126680 1026 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm23318-201ENSMUST00000158000 108 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm27266-201ENSMUST00000184521 123 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Mirlet7e-201ENSMUST00000196737 93 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 AC158633.1-201ENSMUST00000219892 649 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm5925-201ENSMUST00000105016 1497 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm37205-201ENSMUST00000194820 2736 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Gm45762-201ENSMUST00000212863 2619 ntBASIC7.04□□□□□ -1.28
Usp47Q8BY87 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Gm10723-201ENSMUST00000195366 6918 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Gm29332-201ENSMUST00000190829 227 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 Gm44952-201ENSMUST00000204443 433 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 Gm4290-201ENSMUST00000206897 814 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 AC131117.2-203ENSMUST00000225886 950 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 AC146601.1-201ENSMUST00000227910 905 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Usp47Q8BY87 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 AC153494.1-201ENSMUST00000218664 3041 ntBASIC7.03□□□□□ -1.28
Usp47Q8BY87 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Usp47Q8BY87 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Usp47Q8BY87 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Usp47Q8BY87 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Usp47Q8BY87 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
Usp47Q8BY87 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Usp47Q8BY87 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm22020-201ENSMUST00000104358 136 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm15786-201ENSMUST00000121079 450 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm24944-201ENSMUST00000158330 128 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm37243-201ENSMUST00000193407 595 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Mir5121-201ENSMUST00000198528 74 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm3912-203ENSMUST00000211024 367 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm7368-201ENSMUST00000213307 367 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 AC138284.2-201ENSMUST00000213982 567 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 AC144772.1-201ENSMUST00000226372 2398 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Gm37010-201ENSMUST00000194539 1704 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC7.02□□□□□ -1.29
Usp47Q8BY87 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Usp47Q8BY87 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Gm43887-201ENSMUST00000204727 3186 ntBASIC7.01□□□□□ -1.29
Usp47Q8BY87 Gm43281-201ENSMUST00000202522 2704 ntBASIC7.01□□□□□ -1.29
Usp47Q8BY87 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Gm8891-201ENSMUST00000198546 832 ntBASIC7.01□□□□□ -1.29
Usp47Q8BY87 AC174780.1-201ENSMUST00000199415 1107 ntBASIC7.01□□□□□ -1.29
Usp47Q8BY87 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC7.01□□□□□ -1.29
Usp47Q8BY87 AC131178.1-201ENSMUST00000228649 492 ntBASIC7.01□□□□□ -1.29
Usp47Q8BY87 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Usp47Q8BY87 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms