Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Pcdh19Q80TF3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm44675-201ENSMUST00000208188 2927 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm26144-201ENSMUST00000104475 132 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm13087-201ENSMUST00000118298 256 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm12565-201ENSMUST00000119004 649 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm15452-201ENSMUST00000119877 240 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm12654-201ENSMUST00000120387 587 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm13593-201ENSMUST00000121329 692 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm12181-201ENSMUST00000121448 531 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm8121-201ENSMUST00000153583 499 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm26349-201ENSMUST00000157530 130 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm15257-201ENSMUST00000177680 883 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm15252-201ENSMUST00000177750 883 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm15260-201ENSMUST00000179402 883 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm27970-201ENSMUST00000184854 407 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm28094-201ENSMUST00000185262 390 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm8367-201ENSMUST00000186145 887 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm28412-201ENSMUST00000187243 177 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm29284-201ENSMUST00000188363 255 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm18553-201ENSMUST00000194152 634 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm6436-201ENSMUST00000077163 451 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm10356-201ENSMUST00000097152 1258 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Pcdh19Q80TF3 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm11386-201ENSMUST00000117761 347 ntBASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm6664-201ENSMUST00000119138 468 ntBASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm12438-201ENSMUST00000122034 336 ntBASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm13368-201ENSMUST00000122443 430 ntBASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Pcdh19Q80TF3 Gm23903-201ENSMUST00000157566 131 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms