Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 AC115760.1-201ENSMUST00000225160 1327 ntBASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Gm45322-201ENSMUST00000211642 1361 ntBASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.67□□□□□ -1.5
Sp140Q6NSQ5 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm25647-201ENSMUST00000101832 78 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm25823-201ENSMUST00000101995 78 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm12833-201ENSMUST00000136112 477 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm24687-201ENSMUST00000157758 241 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm24435-201ENSMUST00000157886 110 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm17043-201ENSMUST00000164621 1283 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm18397-201ENSMUST00000176704 587 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm24220-201ENSMUST00000177753 79 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm25988-201ENSMUST00000177759 79 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm23471-201ENSMUST00000177886 79 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm26488-201ENSMUST00000178225 79 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm23449-201ENSMUST00000179208 79 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm25221-201ENSMUST00000180051 79 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm18553-201ENSMUST00000194152 634 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm45789-201ENSMUST00000213038 364 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm46136-201ENSMUST00000214730 565 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm8137-201ENSMUST00000218997 463 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm32300-201ENSMUST00000221735 515 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 AC121947.1-201ENSMUST00000221755 1145 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Mir375-201ENSMUST00000083682 64 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm17165-201ENSMUST00000096155 493 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm43164-201ENSMUST00000202529 2128 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Sp140Q6NSQ5 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm6982-201ENSMUST00000118752 1560 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm13772-201ENSMUST00000118431 317 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm11826-201ENSMUST00000118781 438 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm11746-201ENSMUST00000119843 821 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.65□□□□□ -1.5
Sp140Q6NSQ5 Gm8545-201ENSMUST00000120692 801 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms