Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm8229-201ENSMUST00000168161 1403 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Sh3rf1Q69ZI1 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm11105-201ENSMUST00000112781 478 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm13338-201ENSMUST00000120235 361 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm15750-201ENSMUST00000120970 616 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm14678-201ENSMUST00000121396 482 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm2986-201ENSMUST00000121603 382 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm14530-201ENSMUST00000122391 333 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm24383-201ENSMUST00000122691 333 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm25559-201ENSMUST00000157182 74 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm23386-201ENSMUST00000158585 144 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm22523-201ENSMUST00000158696 100 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm3140-201ENSMUST00000163523 481 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm21772-201ENSMUST00000169213 478 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm5456-201ENSMUST00000170706 844 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm17126-201ENSMUST00000172276 523 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm20615-201ENSMUST00000177503 705 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm25244-201ENSMUST00000178089 132 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm17045-201ENSMUST00000178600 844 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm28023-201ENSMUST00000184556 60 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm27825-201ENSMUST00000184586 60 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm5260-201ENSMUST00000186157 949 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm43383-201ENSMUST00000195981 469 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Igkv15-97-201ENSMUST00000197637 339 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 AC101984.1-201ENSMUST00000219639 402 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 AC167140.1-201ENSMUST00000224710 403 ntBASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Sh3rf1Q69ZI1 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Sh3rf1Q69ZI1 Gm43523-201ENSMUST00000197397 2878 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm28320-201ENSMUST00000187777 2273 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm44440-201ENSMUST00000203139 2373 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm45819-201ENSMUST00000210940 1751 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm24608-201ENSMUST00000104381 136 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Mir466n-201ENSMUST00000104798 94 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm25111-201ENSMUST00000116686 147 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm11821-201ENSMUST00000117335 979 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm15621-201ENSMUST00000119162 364 ntBASIC6.39□□□□□ -1.39
Sh3rf1Q69ZI1 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 104 ms