Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm8524-201ENSMUST00000186232 379 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm29105-201ENSMUST00000187256 450 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Igkv4-83-201ENSMUST00000196933 334 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 AC122905.2-201ENSMUST00000220325 269 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 CT030238.4-203ENSMUST00000227343 836 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm37911-201ENSMUST00000193099 1545 ntBASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim41Q5NCC3 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm11804-201ENSMUST00000121663 468 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm44265-201ENSMUST00000203631 465 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm18007-201ENSMUST00000205019 844 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 AC154861.1-201ENSMUST00000223767 800 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm2531-201ENSMUST00000075609 512 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm38278-201ENSMUST00000194715 1365 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Gm37255-201ENSMUST00000193302 3060 ntBASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim41Q5NCC3 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm18313-201ENSMUST00000221036 1784 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm23692-201ENSMUST00000101881 160 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm22272-201ENSMUST00000104039 134 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm6181-201ENSMUST00000117187 264 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm20491-201ENSMUST00000173765 1241 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm20453-201ENSMUST00000173968 226 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm22951-201ENSMUST00000179471 107 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm28871-201ENSMUST00000186191 687 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm37493-201ENSMUST00000193167 433 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm37380-201ENSMUST00000193752 397 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm44330-201ENSMUST00000200106 143 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Ighv1-79-201ENSMUST00000200152 350 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm2011-203ENSMUST00000203750 435 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm19653-201ENSMUST00000204326 1039 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm18423-201ENSMUST00000205144 1074 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Gm42653-201ENSMUST00000200644 2839 ntBASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim41Q5NCC3 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim41Q5NCC3 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms