Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm45249-201ENSMUST00000211021 348 ntBASIC5.4□□□□□ -1.54
Trim43aQ3TL54 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Gm26330-201ENSMUST00000082817 104 ntBASIC5.4□□□□□ -1.54
Trim43aQ3TL54 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Trim43aQ3TL54 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim43aQ3TL54 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.4□□□□□ -1.55
Trim43aQ3TL54 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.4□□□□□ -1.55
Trim43aQ3TL54 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Trim43aQ3TL54 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.4□□□□□ -1.55
Trim43aQ3TL54 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.55
Trim43aQ3TL54 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm22273-201ENSMUST00000104040 132 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm11677-201ENSMUST00000121349 977 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm24371-201ENSMUST00000122662 267 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm26731-201ENSMUST00000180683 543 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Mir6539-201ENSMUST00000183732 110 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm19086-201ENSMUST00000190772 665 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm38670-201ENSMUST00000199248 77 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm42458-201ENSMUST00000201914 369 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Trim43aQ3TL54 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm24350-201ENSMUST00000104163 133 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm24230-201ENSMUST00000104313 129 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm13690-201ENSMUST00000118989 285 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm15388-201ENSMUST00000121578 726 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm23965-201ENSMUST00000157969 142 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm6673-201ENSMUST00000166114 700 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm27762-201ENSMUST00000183417 109 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Mir6417-201ENSMUST00000183815 116 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm27985-201ENSMUST00000185112 378 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm37682-201ENSMUST00000191776 522 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm8874-201ENSMUST00000196826 286 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Trim43aQ3TL54 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Trim43aQ3TL54 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms