Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Amd-ps1-201ENSMUST00000120127 994 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm25962-201ENSMUST00000157173 168 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm24735-201ENSMUST00000158859 118 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Ear-ps9-201ENSMUST00000161963 460 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm4540-201ENSMUST00000170669 429 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm19807-201ENSMUST00000173971 667 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Mir6416-201ENSMUST00000183664 117 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm5842-201ENSMUST00000195073 622 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm44243-201ENSMUST00000204323 692 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC8.15□□□□□ -1.1
Col17a1Q07563 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC8.15□□□□□ -1.1
Col17a1Q07563 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Col17a1Q07563 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Col17a1Q07563 Gm43327-201ENSMUST00000199285 4055 ntBASIC8.15□□□□□ -1.1
Col17a1Q07563 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Col17a1Q07563 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Col17a1Q07563 Vmn1r204-202ENSMUST00000228195 2936 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Col17a1Q07563 Gm19035-201ENSMUST00000193299 1742 ntBASIC8.15□□□□□ -1.11
Col17a1Q07563 Gm7416-201ENSMUST00000117448 1487 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm43784-201ENSMUST00000202922 2436 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm36947-201ENSMUST00000194709 2249 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC8.14□□□□□ -1.11
Col17a1Q07563 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm6647-201ENSMUST00000170514 641 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm27189-201ENSMUST00000184119 190 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm28917-201ENSMUST00000187294 237 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm43136-201ENSMUST00000200403 636 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm44332-201ENSMUST00000203712 433 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC8.14□□□□□ -1.11
Col17a1Q07563 AL590503.1-201ENSMUST00000222053 321 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 AC154371.1-201ENSMUST00000226600 412 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm38125-201ENSMUST00000194136 3438 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Col17a1Q07563 Gm37106-201ENSMUST00000193760 1532 ntBASIC8.14□□□□□ -1.11
Col17a1Q07563 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Col17a1Q07563 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm13678-201ENSMUST00000118926 340 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm15403-201ENSMUST00000119343 1227 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm14957-201ENSMUST00000121069 817 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm17075-201ENSMUST00000171924 670 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm37884-201ENSMUST00000191857 818 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm37005-201ENSMUST00000193281 1164 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm36997-201ENSMUST00000195090 707 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm44751-201ENSMUST00000208302 4387 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col17a1Q07563 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm13092-201ENSMUST00000136346 260 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm20689-201ENSMUST00000176033 279 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm28648-201ENSMUST00000190092 343 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm8189-203ENSMUST00000211159 1225 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col17a1Q07563 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Col17a1Q07563 AC139754.3-201ENSMUST00000220444 1627 ntBASIC8.13□□□□□ -1.11
Col17a1Q07563 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col17a1Q07563 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Col17a1Q07563 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.12□□□□□ -1.11
Col17a1Q07563 Gm43175-201ENSMUST00000198450 3810 ntBASIC8.12□□□□□ -1.11
Col17a1Q07563 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC8.12□□□□□ -1.11
Col17a1Q07563 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms